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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_D11G2561 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 409aa MW: 44783.3 Da PI: 5.3916 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.6 | 7.4e-15 | 211 | 266 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + kr rr+ +NRe+ArrsR+RK+a + eLe v +L eN L k l +++ + + Gh_D11G2561 211 DAKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENANLLKSLTDISQRYNE 266 689*****************************************999988887765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.4E-16 | 209 | 273 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.404 | 211 | 266 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.8E-13 | 212 | 264 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.9E-11 | 213 | 265 | No hit | No description |
SuperFamily | SSF57959 | 2.01E-11 | 213 | 262 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 216 | 231 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 1.1E-32 | 280 | 403 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042802 | Molecular Function | identical protein binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 409 aa Download sequence Send to blast |
MHKTTKKPAN DPTNHTMDRV FSVEEVPDHF WSSSAADGGD DDKNICPSSE MNRSASEWAF 60 QQFLREEVDK KGEDNEEEEA KENGCFENNK HDNSPADVED YQAFLKKKLN LACAAVAMSM 120 ASFAKPQDSA ARADSGSQTS NTPQLGSKTV SRGAGDKDDN AVAEVPSFPS GQKKLRAQVR 180 PSTSTGSSKE QSDEDEVEGE NETMENMDPA DAKRVRRMLS NRESARRSRR RKQAHLTELE 240 SQVSQLRVEN ANLLKSLTDI SQRYNEAAVN NRILKADVET LKAKVKMAVE AIKRTTGLNP 300 VFHALPEIPS MSSFDGCPSD TSTDAAVYEE DGPKHTLYQA AANDSISTHD LRINNALADI 360 SSVENIQPVS EGSAVTGNKI GRTASLQRVA SLEHLQKRIR GGVSLNGKQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 225 | 232 | RRSRRRKQ |
2 | 227 | 232 | SRRRKQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ghi.3805 | 0.0 | boll| ovule |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00040 | PBM | Transfer from AT5G28770 | Download |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012492794.1 | 0.0 | PREDICTED: light-inducible protein CPRF2-like isoform X2 | ||||
Swissprot | Q99090 | 1e-121 | CPRF2_PETCR; Light-inducible protein CPRF2 | ||||
TrEMBL | A0A0D2PFQ0 | 0.0 | A0A0D2PFQ0_G | ||||
STRING | VIT_14s0030g02200.t01 | 1e-140 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6846 | 27 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.2 | 3e-78 | bZIP family protein |